Job Description P0AF28 Confidence 64.58% Date Thu Jan 5 11:24:59 GMT 2012 Rank 320 Aligned Residues 44 % Identity 11% Template d2coha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 1.50

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		L	P	N	K	M	I	A	R	R	L	D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	.	.	.	.	.	.	.	.	.	M	K	L	K	S	R	V	E	A	A	V	W	V	H	Q	E	R
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	H	D	E	L	A	A	A	V	G	S	V	R	E	T	V	T	K	V	I	G	E	L	A	R	E	G	Y	I	R	S	G	Y	G	K	I	Q	L	L	D	L	K	G	L	K	E	L	A	E	S	R	G
Template Known Secondary structure												T																T	T	S					T	T					S										T	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions