 |
Job Description | P0AF28 | Confidence | 89.23% | Date | Thu Jan 5 11:24:59 GMT 2012 |
Rank | 189 | Aligned Residues | 43 |
% Identity | 40% | Template | c3k2zA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:lexa repressor; |
PDBTitle: crystal structure of a lexa protein from thermotoga maritima
|
Resolution | 1.37 Å |
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 170 | . | |
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | T | P | R | E | R | D | I | L | K | L | I | . |
. |
. |
. |
. |
A | Q | G | L | . |
. |
P | N | K | M | I | A | R | R | L | D | I | T | E | S | T | V | K | V | H | V | K | H | M | L | K | K |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |   | . | . | . | . | . |   |   |
|   | . | . |
|   |
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
D | L | T | E | R | Q | R | K | V | L | L | F | I | E | E | F | I | E | K | N | G | Y | P | P | S | V | R | E | I | A | R | R | F | R | I | T | P | R | G | A | L | L | H | L | I | A | L | E | K | K |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|