|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | L | L | I | D | D | H | P | M | L | R | T | G | V | K | Q | L | I | S | M | A | P | D | I | T | V | V | G | E | A | S | N | G | E | Q | G | I | E | L | A | E | S | L | D | P | D | L | I | L | L | D | L | N | M | P | G | M | N | G | L | E | T | L | D | K | L | R | E | K | S | L | S | G | R | I | V | V | F | S |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
| . | . |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |
|
|
Template Sequence |   |
S | V | L | I | V | E | D | E | E | S | L | A | D | P | L | A | F | L | L | R | K | E | G | . |
. |
F | E | A | T | V | V | T | D | G | P | A | A | L | A | E | F | D | R | A | G | A | D | I | V | L | L | D | L | M | L | P | G | M | S | G | T | D | V | C | K | Q | L | R | A | R | S | . |
S | V | P | V | I | M | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . |
|  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  | S | S |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
| . | S |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | N | H | E | E | D | V | V | T | A | L | K | R | G | A | D | G | Y | L | L | K | D | M | E | P | E | D | L | L | K | A | L | . |
. |
. |
. |
. |
. |
H | Q | A | A | A | G | E | M | V | L | S | E | A | L | T | P | V | L | A | A | S | L | R | A | N | R | A | T | T | E | R | D | V | N | Q | L | T | P | R | E | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
Template Sequence |   |
A | R | D | S | E | I | D | K | V | V | G | L | E | L | G | A | D | D | Y | V | T | K | P | Y | S | A | R | E | L | I | A | R | I | R | A | V | L | R | R | G | G | D | D | D | S | E | M | S | D | G | V | L | E | S | G | P | V | R | M | D | V | E | R | H | V | V | S | V | N | G | D | T | I | T | L | P | L | K | E | F |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| T | T | S | T | T |
|
| S |
|  |  |  | T | T |  |  |  |  | T | T | T | T |  |  |  |  | S | S | B |
|
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | |
|
|
|
. | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | L | K | L | I | A | Q | G | . |
. |
. |
. |
L | P | N | K | M | I | A | R | R | L | . |
. |
. |
. |
. |
D | I | T | E | S | T | V | K | V | H | V | K | H | M | L | K | K | M | K | L | K | S |
Query Conservation |   |
  |
|
|   |   |   |   |   |
| . | . | . | . |   |
|   |
|
|
|
|   |   |
| . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |
Template Sequence |   |
D | L | L | E | Y | L | M | R | N | S | G | R | V | L | T | R | G | Q | L | I | D | R | V | W | G | A | D | Y | V | G | D | T | K | T | L | D | V | H | V | K | R | L | R | S | K | I | E | A | D | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
  |