Job Description P0AF28 Confidence 78.43% Date Thu Jan 5 11:24:59 GMT 2012 Rank 239 Aligned Residues 54 % Identity 20% Template c2o3fC_ PDB info PDB header:transcription Chain: C: PDB Molecule:putative hth-type transcriptional regulator ybbh; PDBTitle: structural genomics, the crystal structure of the n-2 terminal domain of the putative transcriptional regulator3 ybbh from bacillus subtilis subsp. subtilis str. 168. Resolution 1.75 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		N	Q	L	T	P	R	E	R	D	I	L	K	L	I	A	Q	G	L	.	.	.	.	.	P	N	K	M	I	A	R	R	L	D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K	L	K	S	R	V	E	A	A	V	W	V	H	Q
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.																	.	.	.	.					.
Template Conservation																																									.	.	.	.					.
Template Sequence		X	H	L	P	P	S	E	R	K	L	A	D	Y	I	L	A	H	P	H	A	I	E	S	T	V	N	E	I	S	A	L	A	N	S	S	D	A	A	V	.	.	.	.	I	R	L	C	.	S	L	G	L	K	G	F	Q	D	L	X	R	V	A	G	D
Template Known Secondary structure																						T	T											T							.	.	.	.					.			S		S	S	T	T	T
Template Predicted Secondary structure																																									.	.	.	.					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions