Job Description P0AF28 Confidence 92.93% Date Thu Jan 5 11:24:59 GMT 2012 Rank 163 Aligned Residues 74 % Identity 16% Template c2k4jA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: arsr dna binding domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.											.	.	.	.	.
Query SS confidence																																																.	.	.	.											.	.	.	.	.
Query Sequence		G	E	M	V	L	S	E	A	L	T	P	V	L	A	A	S	L	R	A	N	R	A	T	T	E	R	D	V	N	Q	L	T	P	R	E	R	D	I	L	K	L	I	A	Q	G	L	.	.	.	.	P	N	K	M	I	A	R	R	L	D	.	.	.	.	.	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K
Query Conservation																																																.	.	.	.											.	.	.	.	.
Alig confidence																																																.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		S	E	E	V	S	E	P	G	D	A	N	I	F	R	V	D	K	D	S	R	E	V	Y	M	H	E	K	K	L	D	L	T	R	A	E	Y	E	I	L	S	L	L	I	S	K	K	G	Y	V	F	S	R	E	S	I	A	I	E	S	E	S	I	N	P	E	S	S	N	K	S	I	D	V	I	I	G	R	L	R	S
Template Known Secondary structure					T	T						T	T					T	T	T	T					T	T					S																												T			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		197	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		92	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions