Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF28
Confidence99.47%DateThu Jan 5 11:24:59 GMT 2012
Rank77Aligned Residues57
% Identity33%Templatec2jpcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200.........210.....
Predicted Secondary structure 
























Query SS confidence 
























































Query Sequence  RERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI
Query Conservation   
  

     
 
 



  
 

  

  

  
  

 
  
 

   
   

Alig confidence 
























































Template Conservation 

  

   
 
 
  


  
 

  

      
  

 
  
  

  
   

Template Sequence  RERQVLKLIDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCARRMRL
Template Known Secondary structure  TS

ST
S
T
SS
S

Template Predicted Secondary structure 














Template SS confidence 
























































   16...20.........30.........40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions