Job Description P0AF28 Confidence 93.50% Date Thu Jan 5 11:24:59 GMT 2012 Rank 158 Aligned Residues 69 % Identity 23% Template c2hwvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. Resolution 1.90 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.														.	.	.	.	.
Query SS confidence																																								.	.	.	.														.	.	.	.	.
Query Sequence		S	E	A	L	T	P	V	L	A	A	S	L	R	A	N	R	A	T	T	E	R	D	V	N	Q	L	T	P	R	E	R	D	I	L	K	L	I	A	.	.	.	.	Q	G	L	P	N	K	M	I	A	R	R	L	D	.	.	.	.	.	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K
Query Conservation																																								.	.	.	.														.	.	.	.	.
Alig confidence																																								.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		S	H	M	T	I	G	D	L	T	I	H	P	D	A	Y	M	V	S	K	R	G	E	K	I	E	L	T	H	R	E	F	E	L	L	Y	Y	L	A	K	H	I	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	V	R	R	L	R	E	K	I	E
Template Known Secondary structure							T	T					S	S	S	S					T	T																			T	T	T			B										T		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions