 |
Job Description | P0AF28 | Confidence | 92.61% | Date | Thu Jan 5 11:24:59 GMT 2012 |
Rank | 170 | Aligned Residues | 62 |
% Identity | 13% | Template | c2hqnA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:putative transcriptional regulator; |
PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
|
Resolution | UNK |
|
 |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
|
|
. | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | A | S | L | R | A | N | R | A | T | T | E | R | D | V | N | Q | L | T | P | R | E | R | D | I | L | K | L | I | A | Q | G | L | . |
. |
. |
. |
P | N | K | M | I | A | R | R | L | D | . |
. |
. |
. |
. |
I | T | E | S | T | V | K | V | H | V | K | H | M | L | K | K | M | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|   | . | . | . | . |
|   |
|
|
|
|   |   |
|   | . | . | . | . | . |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|   |
Template Sequence |   |
L | T | I | S | P | D | E | E | K | I | I | Y | K | G | R | E | V | E | V | K | G | K | P | F | E | V | L | T | H | L | A | R | H | R | D | Q | I | V | S | K | E | Q | L | L | D | A | I | W | E | E | P | E | M | V | T | P | N | V | I | E | V | A | I | N | Q | I | R | Q | K | M | D |
Template Known Secondary structure |   |
 |  |  |  | T | T | T | T |  |  |  |  | T | T |  |  |  |  |
|
|
| S | T |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| G | G | G |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|