Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF28
Confidence99.69%DateThu Jan 5 11:24:59 GMT 2012
Rank16Aligned Residues70
% Identity21%Templatec1h0mD_
PDB info PDB header:transcription/dnaChain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI
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Template Sequence  TTPTAEDAAWLDPKEATYLRWIAVGKTXEEIADVEGVKYNSVRVKLREAXKRFDVRSKAHLTALAIRRKL
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   164.....170.........180.........190.........200.........210.........220.........230...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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