Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 14 Aligned Residues 221 % Identity 17% Template c3fpkB_ PDB info PDB header:flavoprotein, oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: crystal structure of ferredoxin-nadp reductase from salmonella2 typhimurium Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	V	W	T	I	S	L	I	C	H	D	Y	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	S	A	E	.	T	L	R	A	Y	T	I	S	S	T	P	G	V	S	E	Y	I	T	L	T	V	R	R	I	D	D	G	V	G	S	Q	W	L	T	R
Query Conservation																																														.
Alig confidence																											.																			.														.
Template Conservation																											.																																	.
Template Sequence		W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	I	.	N	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	A	P	D	N	.	P	N	L	E	F	Y	L	V	T	V	P	Q	G	K	L	S	P	R	L	A	A
Template Known Secondary structure														S	S	S											.					T	T										T	T											S		T	T		.	S	S									T	T		S	S						T
Template Predicted Secondary structure																											.																																	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	D	D	K	A	E	.	.	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	A	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	P	V
Query Conservation																										.	.
Alig confidence		.																								.	.
Template Conservation		.
Template Sequence		.	L	K	P	G	D	E	V	Q	V	V	S	D	A	S	G	F	F	V	L	D	E	V	P	D	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	Y	G	Q	D	V	A	R	F	K	N	L	V	L	V	H	A	A	R	F	A	A	D	L	S	Y	L	P	L	M	L	E	L	Q	Q
Template Known Secondary structure		.			T	T							S	S		B		S		S	G	G	G	S				S								G	G	G	G												S		T	T		S									S	S	G	G	G		T	T
Template Predicted Secondary structure		.
Template SS confidence
			82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		166									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																																.	.
Query SS confidence			.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																																.	.
Query Sequence		T	.	.	.	.	.	.	.	.	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	.	.	.	.	.	.	.	.	G	V	P	D	L	A	S	R	T	V	M	T	C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A	L	G	V	.	.	T	R	F	F	K	E	K	F
Query Conservation			.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																																.	.
Alig confidence			.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	N	V	P	G	S	L	T	G	R	V	P	A	L	I	E	N	G	E	L	E	K	A	V	G	L	P	M	D	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R	R	R	P	G
Template Known Secondary structure			T	T	T	S								S	S				T	T				S								T	S							T	S				T	T	T																											B		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		228	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	P	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	T	A	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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