Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 19 Aligned Residues 240 % Identity 21% Template c2rc5D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: refined structure of fnr from leptospira interrogans Resolution 2.43 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.															.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	M	P	T	N	Q	C	P	W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	T	I	S	L	I	C	H	.	D	Y	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	.	.	.	.	.	.	.	.	.	.	.	.	N	S	A	E	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	L	F	K	K	S	N	P	Y	K	A	K	V	I	S	N	V	L	L	T	P	E	T	G	T	G	K	R	P	K	K	E	G	E	A	L	V	H	R	I	V	L	A	I	D	H	S	A	Y	P	Y	V	I	G	Q	S	G	G	V	I	P	P	G	E	D	P	E	K	K	A	K	G	L	A	D	V	G	Y	T
Template Known Secondary structure				S	B	B	T	T	B													S			T	T	S	S	S	S		T	T	S														T	T	T					T	T								S	S	B								T		S			B
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		54	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.														.	.	.	.	.	.	.	.	.	.																															.	.
Query SS confidence												.	.	.														.	.	.	.	.	.	.	.	.	.																															.	.
Query Sequence		L	R	A	Y	T	I	S	S	T	P	.	.	.	G	V	S	E	Y	I	T	L	T	V	R	R	I	.	.	.	.	.	.	.	.	.	.	D	D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	.	.	D	D	K	A	E	D	K	F	L	L	L	A
Query Conservation												.	.	.														.	.	.	.	.	.	.	.	.	.																															.	.
Alig confidence												.	.	.														.	.	.	.	.	.	.	.	.	.												.																			.	.
Template Conservation																																																	.
Template Sequence		V	R	L	Y	S	I	A	S	P	S	Y	F	G	M	K	E	D	N	I	E	F	I	I	K	R	D	N	I	Y	D	E	N	G	N	I	Q	F	K	G	V	C	S	N	Y	M	C	D	.	L	K	P	G	D	E	V	T	M	T	G	P	S	G	K	K	F	L	L	P	N	T	D	F	S	G	D	I	M	F	L	A
Template Known Secondary structure							B		S							S	S											B			B	T	T	T	B		S		B									T	.			T	T											S	S	S				S	S		B		S
Template Predicted Secondary structure																																																	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	.	.	.	A	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	P	V	T	.	.	.	.	.	.	.	.	.	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L
Query Conservation																							.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	T	G	I	A	P	F	I	G	M	S	E	E	L	L	E	H	K	L	I	K	F	T	G	N	I	T	L	V	Y	G	A	P	Y	S	D	E	L	V	M	M	D	Y	L	K	G	L	E	S	K	H	K	N	F	K	L	I	T	A	I	S	R	E	E	K	N	S	F	D	G	G	R	M	Y	I	S	H	R	V
Template Known Secondary structure			G	G	G	G												T	T		S	S		B		S									S	S	G	G	G			S												S	S								T	T	T		B		T	T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		187	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure									.	.	.	.	.													.
Query SS confidence									.	.	.	.	.													.
Query Sequence		L	A	G	V	P	D	L	.	.	.	.	.	A	S	R	T	V	M	T	C	G	P	A	P	.	Y	M	D	W	V	E	Q	E	V	K	A	L	G	V	T	R	F	F	K	E	K	F	F	T	P	V	A	E	A	A	T	S	G	L	K	F
Query Conservation									.	.	.	.	.													.
Alig confidence									.	.	.	.	.													.
Template Conservation
Template Sequence		R	E	Q	A	E	A	V	K	K	I	L	N	G	G	G	R	F	Y	I	C	G	G	P	K	G	M	E	K	G	V	I	E	E	I	Q	K	I	S	G	N	T	G	T	Y	E	E	F	K	H	H	L	E	G	A	H	Q	L	F	V	E	T
Template Known Secondary structure				T										T	T								S	S	T	T	T													T			S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions