Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 8 Aligned Residues 227 % Identity 19% Template c2bgjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp(h) reductase; PDBTitle: x-ray structure of the ferredoxin-nadp(h) reductase from2 rhodobacter capsulatus at 2.1 angstroms Resolution 2.1 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		P	W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	V	W	T	I	S	L	I	C	H	D	Y	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	.	.	N	S	A	E	T	L	R	A	Y	T	I	S	S	T	P	G	V	S	E	Y	I	T	L	T	V	R	R	I	D	D	G	V	G	S	Q	W	L	T
Query Conservation																																										.	.
Alig confidence																																										.	.																		.
Template Conservation																																																													.
Template Sequence		P	D	A	Q	T	V	T	S	V	R	H	W	T	D	T	L	F	S	F	R	V	T	R	P	Q	T	L	R	F	R	S	G	E	F	V	M	I	G	L	L	D	D	N	G	K	P	I	M	R	A	Y	S	I	A	S	P	A	W	D	.	E	E	L	E	F	Y	S	I	K	V	P	D	G	P	L	T	S	R	L	Q
Template Known Secondary structure															T	T										T	T					T	T										T	T	S											S		T	T		.	S										T	T		T	T					T
Template Predicted Secondary structure																																																													.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	D	D	K	A	E	.	.	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	A	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	P
Query Conservation																											.	.
Alig confidence			.																								.	.
Template Conservation			.
Template Sequence		H	.	I	K	V	G	E	Q	I	I	L	R	P	K	P	V	G	T	L	V	I	D	A	L	L	P	G	K	R	L	W	F	L	A	T	G	T	G	I	A	P	F	A	S	L	M	R	E	P	E	A	Y	E	K	F	D	E	V	I	M	M	H	A	C	R	T	V	A	E	L	E	Y	G	R	Q	L	V	E	A	L
Template Known Secondary structure		T	.			T	T												S		S	G	G	G	B				S								G	G	G	G							T	T									S									S	S	G	G	G	G
Template Predicted Secondary structure			.
Template SS confidence
		95		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		165														.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																																							.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																																							.	.
Query Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	.	.	.	.	.	.	.	.	.	T	R	E	L	L	A	G	V	P	D	L	A	S	R	T	V	M	T	C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A	L	G	V	T	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																																							.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		Q	E	D	P	L	I	G	E	L	V	E	G	K	L	K	Y	Y	P	T	T	T	R	E	E	F	H	H	M	G	R	I	T	D	N	L	A	S	G	K	V	F	E	D	L	G	I	A	P	M	N	P	E	T	D	R	A	M	V	C	G	S	L	A	F	N	V	D	V	M	K	V	L	E	S	Y	G	L	R	E	G
Template Known Secondary structure				S	T	T					T		S									S	S	S			S	S	B	S									S							T						T	T	T																						T	T			B
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		221	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	F	F	K	E	.	K	F	F	T	P	V	A	E	A	A	T	S
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		A	N	S	E	P	R	E	F	V	V	E	K	A	F	V	G	E	G
Template Known Secondary structure			S	S	S		B	S						S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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