Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 15 Aligned Residues 223 % Identity 18% Template c1umkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of human erythrocyte nadh-cytochrome b52 reductase Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																			.
Query SS confidence																																				.	.	.																			.
Query Sequence		M	T	M	P	T	N	Q	C	P	W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	V	W	T	I	S	L	I	C	H	D	Y	.	.	.	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	S	A	E	.	T	L	R	A	Y	T	I	S	S	T	P	G	V	S	E	Y	I	T	L	T	V	R	R	I
Query Conservation																																				.	.	.																			.
Alig confidence																																				.	.	.																			.
Template Conservation
Template Sequence		I	T	L	E	S	P	D	I	K	Y	P	L	R	L	I	D	R	E	I	I	S	H	D	T	R	R	F	R	F	A	L	P	S	P	Q	H	I	L	G	L	P	V	G	Q	H	I	Y	L	S	A	R	I	D	G	N	L	V	V	R	P	Y	T	P	I	S	S	D	D	D	K	G	F	V	D	L	V	I	K	V	Y
Template Known Secondary structure		B	S				T	T														S	S	S									S	S	T	T		B					T	T										T	T										S	S		T	T			S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
											77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R
Query Conservation		.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		F	K	D	T	H	P	K	F	P	A	G	G	K	M	S	Q	Y	L	E	S	.	M	Q	I	G	D	T	I	E	F	R	G	P	S	G	L	L	V	Y	Q	G	K	G	K	F	A	I	R	P	D	K	K	S	N	P	I	I	R	T	V	K	S	V	G	M	I	A	G	G	T	G	I	T	P	M	L	Q	V	I	R
Template Known Secondary structure			S	S	S	B	T	T	B	T	T											.			T	T											S						T	T						S	S	T	T	S								S								G	G	G
Template Predicted Secondary structure																						.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		132	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.
Predicted Secondary structure							.																															.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence							.																															.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		W	L	A	K	N	.	R	P	Q	A	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	P	V	T	.	.	.	.	.	.	.	.	.	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	P	D	L	.	.	A	S	R	T	V	M
Query Conservation							.																															.	.	.	.	.	.	.	.	.																												.	.
Alig confidence							.																															.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		A	I	M	K	D	P	D	D	H	T	V	C	H	L	L	F	A	N	Q	T	E	K	D	I	L	L	R	P	E	L	E	E	L	R	N	K	H	S	A	R	F	K	L	W	Y	T	L	D	R	A	P	E	A	W	D	Y	G	Q	G	F	V	N	E	E	M	I	R	D	H	L	P	P	P	E	E	E	P	L	V	L
Template Known Secondary structure					T		T	T												S	S	G	G	G		T	T												T	T	T								S	S			S	S		S	S			S	S										S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220			.	.	.	.
Predicted Secondary structure												.												.	.
Query SS confidence												.												.	.
Query Sequence		T	C	G	P	A	P	Y	M	D	W	.	V	E	Q	E	V	K	A	L	G	V	T	.	.	R	F	F	K
Query Conservation												.												.	.
Alig confidence												.												.	.
Template Conservation
Template Sequence		M	C	G	P	P	P	M	I	Q	Y	A	C	L	P	N	L	D	H	V	G	H	P	T	E	R	C	F	V
Template Known Secondary structure				S								T	T								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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