Job Description P75824 Confidence 99.96% Date Thu Jan 5 12:14:39 GMT 2012 Rank 23 Aligned Residues 211 % Identity 21% Template c1tllA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitric-oxide synthase, brain; PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution. Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	N	Q	C	P	W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	.	.	.	.	.	V	W	T	I	S	L	I	C	.	.	H	D	Y	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	K	R	V	S	A	A	R	L	L	S	R	Q	N	L	Q	S	P	K	S	S	R	S	T	I	F	V	R	L	H	T	N	G	N	Q	E	L	Q	Y	Q	P	G	D	H	L	G	V	F	P	G	N	H	E	D	L	V	N	A	L	I	E	R	L	E	D	A	P	P	A	N	H	V	V	K	V	E	M	L	E
Template Known Secondary structure		T	T	S														S		T	T		S	S										T	T		G	G	G				T	T																			T	T		S	S				S		S
Template Predicted Secondary structure
Template SS confidence
		988	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	N	T	A	L	G	V	I	S	N	W	K	D	E	S	R	L	P	P	C	T	I	F	Q	A	F	K	Y	Y	L	D	I	T	T	P	P	T	P	L	Q	L	Q	Q	F	A	S	L	A	T	N	E	K	E	K	Q	R	L	L	V	L	S	K	G	L	Q	E	Y	E	E	W	K	W	G	K	N	P	T	M	V
Template Known Secondary structure						S	S	S										S	S		S	B									T	B			S	S												T	T	B													T	T		S
Template Predicted Secondary structure
Template SS confidence
		1068	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
																						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.												.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	E	T	L	R	A	Y	T	I	S	S	T	P	G	V	.	S	E	Y	I	T	L	T	V	R	R	I	D	.	.	.	.	.	.	.	.	.	.	.	D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																							.
Template Sequence		E	V	L	E	E	F	P	S	I	Q	M	P	A	T	L	L	L	T	Q	L	S	L	L	Q	P	R	Y	Y	S	I	S	S	S	P	D	M	Y	P	D	E	V	H	L	T	V	A	I	V	S	Y	H	T	R	D	G	E	G	P	V	H	H	G	V	C	S	S	W	L	N	.	R	I	Q	A	D	D	V	V	P	C
Template Known Secondary structure							S	T	T	B											S		B								B		S		T	T	T	S	T	T													T	G	G	G	T	S												T	.	T			T	T	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		1148	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.		.	.	.	1220	.	.	.	.	.	.
		98	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.						.
Predicted Secondary structure										.																												.	.	.	.	.																					.													.	.	.	.	.
Query SS confidence										.																												.	.	.	.	.																					.													.	.	.	.	.
Query Sequence		S	D	A	M	G	E	F	T	.	C	D	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	.	.	.	.	.	L	A	K	N	R	P	Q	A	D	V	R	V	I	Y	N	V	R	T	P	Q	.	D	V	I	F	A	D	E	W	R	N	Y	P	.	.	.	.	.	V
Query Conservation										.																												.	.	.	.	.																					.													.	.	.	.	.
Alig confidence										.																												.	.	.	.	.																					.													.	.	.	.	.
Template Conservation
Template Sequence		F	V	R	G	A	P	S	F	H	L	P	R	N	P	Q	V	P	C	I	L	V	G	P	G	T	G	I	A	P	F	R	S	F	W	Q	Q	R	Q	F	D	I	Q	H	K	G	M	N	P	C	P	M	V	L	V	F	G	C	R	Q	S	K	I	D	H	I	Y	R	E	E	T	L	Q	A	K	N	K	G	V	F	R
Template Known Secondary structure							G	G	G	S			S		T	T	S								G	G	G	G	T	T															S														S		T	T	T	T		T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		1227	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		T	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	P	D	L	.	.	.	.	.	.	.	A	S	R	T	V	M	T	C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	Y	T	A	Y	S	R	E	P	D	R	P	K	K	Y	V	Q	D	V	L	Q	E	Q	L	A	E	S	V	Y	R	A	L	K	E	Q	G	G	H	I	Y	V	C	G	D	V	T	M	A	A	D	V	L	K	A	I	Q	R
Template Known Secondary structure								S	S		T	T	S												S	S										T	S
Template Predicted Secondary structure
Template SS confidence
		1307	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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