Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 18 Aligned Residues 215 % Identity 21% Template c1jb9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: crystal structure of the ferredoxin:nadp+ reductase from maize root at2 1.7 angstroms Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.					.
Predicted Secondary structure																							.	.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																							.	.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.
Query Sequence		M	T	M	P	T	N	Q	C	P	W	R	M	Q	V	H	H	I	T	Q	E	T	.	.	.	.	.	P	D	V	W	T	I	S	L	I	C	H	D	Y	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	S	A	.	.	.	.	.	.	.	E	T	L	R	A	Y	T	I	S	S	T	P	.	.	.	.	G
Query Conservation																							.	.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.
Alig confidence																							.	.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		L	N	T	Y	K	P	K	E	P	F	T	A	T	I	V	S	V	E	S	L	V	G	P	K	A	P	G	E	T	C	H	I	V	I	D	H	G	G	N	V	P	Y	W	E	G	Q	S	Y	G	V	I	P	P	G	E	N	P	K	K	P	G	A	P	Q	N	V	R	L	Y	S	I	A	S	T	R	Y	G	D	N	F
Template Known Secondary structure				S	B	B	T	T	B													S		T	T	S	S	S										T	T	S	S				T	T								S	S	B		T	T	S	T	T		B								B		S		T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.														.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		V	S	E	Y	I	T	L	T	V	R	R	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	.	.	D	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.											.																			.	.
Template Conservation																																						.
Template Sequence		D	G	R	T	G	S	L	C	V	R	R	A	V	Y	Y	D	P	E	T	G	K	E	D	P	S	K	N	G	V	C	S	N	F	L	C	N	.	S	K	P	G	D	K	I	Q	L	T	G	P	S	G	K	I	M	L	L	P	E	E	D	P	N	A	T	H	I	M	I	A	T	G	T	G	V	A	P	F	R	G	Y
Template Known Secondary structure		S	S	S												B		T	T	T			B		G	G	G	S									T	.			T	T											S	T	T					S		T	T									G	G	G	G
Template Predicted Secondary structure																																						.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.
Predicted Secondary structure													.	.	.	.	.																								.	.	.	.	.																															.	.	.	.	.
Query SS confidence													.	.	.	.	.																								.	.	.	.	.																															.	.	.	.	.
Query Sequence		R	R	W	L	A	K	N	R	P	Q	A	.	.	.	.	.	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	.	.	.	.	.	P	V	T	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	P	D	L	.	.	.	.	.	A
Query Conservation													.	.	.	.	.																								.	.	.	.	.																															.	.	.	.	.
Alig confidence													.	.	.	.	.																								.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		L	R	R	M	F	M	E	D	V	P	N	Y	R	F	G	G	L	A	W	L	F	L	G	V	A	N	S	D	S	L	L	Y	D	E	E	F	T	S	Y	L	K	Q	Y	P	D	N	F	R	Y	D	K	A	L	S	R	E	Q	K	G	K	M	Y	V	Q	D	K	I	E	E	Y	S	D	E	I	F	K	L	L	D	G
Template Known Secondary structure							T				T	T					S									S	S	G	G	G		S	S												T	T	T								T	T	T														T										T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	V	M	T	C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	H	I	Y	F	C	G	L	K	G	M	M	P	G	I	Q	D	T	L	K	K
Template Known Secondary structure		T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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