Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 2 Aligned Residues 228 % Identity 23% Template c1gvhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket Resolution 2.19 Å

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		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure										.																								.	.	.																		.	.	.
Query SS confidence										.																								.	.	.																		.	.	.
Query Sequence		P	T	N	Q	C	P	W	R	.	M	Q	V	H	H	I	T	Q	E	T	P	D	V	W	T	I	S	L	I	C	H	D	Y	.	.	.	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	S	A	.	.	.	E	T	L	R	A	Y	T	I	S	S	T	P	G	V	S	E	Y	I	T	L	T	V	R	R	I
Query Conservation										.																								.	.	.																		.	.	.
Alig confidence										.																								.	.	.																		.	.	.																	.
Template Conservation																																																																									.
Template Sequence		A	G	G	W	E	G	T	R	D	F	R	I	V	A	K	T	P	R	S	A	L	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	F	P	H	Q	E	I	R	Q	Y	S	L	T	R	K	P	D	G	K	G	.	Y	R	I	A	V	K	R	E
Template Known Secondary structure		T	T			S	S													S	S	S									T	T									T	T										T	T		S	S										S				S	S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	D	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	A	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	G	Q	V	S	N	W	L	H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	M	A	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M	L	A	M	L	D	T	L	A	K	A	G	H	T	A	Q	V	N	W	F	H	A	A	E	N	G	D	V	H	A	F
Template Known Secondary structure		T	T										T			T	T											S							T	T									G	G	G	G														T			S									S		T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.														.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		A	D	E	W	R	N	Y	P	V	T	L	V	A	E	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	P	D	L	A	S	R	T	V	M	T	C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A	L	G	V	T	.	.	R
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Conservation
Template Sequence		A	D	E	V	K	E	L	G	Q	S	L	P	R	F	T	A	H	T	W	Y	R	Q	P	S	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G	A	F	S	D	P	T	M	Q	F	Y	L	C	G	P	V	G	F	M	Q	F	T	A	K	Q	L	V	D	L	G	V	K	Q	E	N
Template Known Secondary structure											T	S	S	S								S	S									T			S			S	S			G	G	G	S	S	S					T	T							S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	K	E	K	F	F	T	P	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	Y	E	C	F	G	P	H	K	V
Template Known Secondary structure							S	S	S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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