Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 13 Aligned Residues 222 % Identity 21% Template c1fncA_ PDB info PDB header:oxidoreductase (nadp+(a),ferredoxin(a)) Chain: A: PDB Molecule:ferredoxin-nadp+ reductase; PDBTitle: refined crystal structure of spinach ferredoxin reductase2 at 1.7 angstroms resolution: oxidized, reduced, and 2'-3 phospho-5'-amp bound states Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70
Predicted Secondary structure																				.	.	.	.	.																															.	.	.	.	.													.	.	.	.
Query SS confidence																				.	.	.	.	.																															.	.	.	.	.													.	.	.	.
Query Sequence		T	N	Q	C	P	W	R	M	Q	V	H	H	I	T	Q	E	T	P	.	.	.	.	.	D	V	W	T	I	S	L	I	C	H	D	Y	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	S	A	E	.	.	.	.	.	T	L	R	A	Y	T	I	S	S	T	P	G	.	.	.	.	V	S	E	Y	I	T
Query Conservation																				.	.	.	.	.																															.	.	.	.	.													.	.	.	.
Alig confidence																				.	.	.	.	.																															.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		K	P	K	T	P	Y	V	G	R	C	L	L	N	T	K	I	T	G	D	D	A	P	G	E	T	W	H	M	V	F	S	H	E	G	E	I	P	Y	R	E	G	Q	S	V	G	V	I	P	D	G	E	D	K	N	G	K	P	H	K	L	R	L	Y	S	I	A	S	S	A	L	G	D	F	G	D	A	K	S	V	S
Template Known Secondary structure		B	T	T	B													S		T	T	S	S	S										T	T						T	T								S	S	B		T	T	S		B										S		T	T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		71	.	.	.	.	.	.										.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																											.
Query SS confidence									.	.	.	.	.	.	.	.	.																											.
Query Sequence		L	T	V	R	R	I	D	.	.	.	.	.	.	.	.	.	D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	.	F	T	C	D	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	A
Query Conservation									.	.	.	.	.	.	.	.	.																											.
Alig confidence									.	.	.	.	.	.	.	.	.											.																.
Template Conservation																												.
Template Sequence		L	C	V	K	R	L	I	Y	T	N	D	A	G	E	T	I	K	G	V	C	S	N	F	L	C	D	.	L	K	P	G	A	E	V	K	L	T	G	P	V	G	K	E	M	L	M	P	K	D	P	N	A	T	I	I	M	L	G	T	G	T	G	I	A	P	F	R	S	F	L	W	K	M	F	F	E	K	H	D	D
Template Known Secondary structure												T	T	S													T	.			T	T											S	T	T			B	S		T	T									G	G	G	G												S			B	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
							141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.																											.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	P	V	T	.	.	.	.	.	.	.	.	.	L	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	P	.	.	.	.	.	.	D	L	A	S	R	T	V	M	T
Query Conservation		.	.	.	.	.																											.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	F	N	G	L	A	W	L	F	L	G	V	P	T	S	S	S	L	L	Y	K	E	E	F	E	K	M	K	E	K	A	P	D	N	F	R	L	D	F	A	V	S	R	E	Q	T	N	E	K	G	E	K	M	Y	I	Q	T	R	M	A	Q	Y	A	V	E	L	W	E	M	L	K	K	D	N	T	Y	V	Y	M
Template Known Secondary structure		B				S									S	S	G	G	G		T	T												T	T	T								T	T	T		B		T	T			B									T	T								T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220			.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.				.	.
Query SS confidence																			.	.	.	.				.	.
Query Sequence		C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A	L	.	.	.	.	G	V	T	.	.	R	F	F	K	E	K	F
Query Conservation																			.	.	.	.				.	.
Alig confidence																			.	.	.	.				.	.
Template Conservation
Template Sequence		C	G	L	K	G	M	E	K	G	I	D	D	I	M	V	S	L	A	A	A	E	G	I	D	W	I	E	Y	K	R	Q	L	K
Template Known Secondary structure																					T	T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions