Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 5 Aligned Residues 219 % Identity 23% Template c1cqxB_ PDB info PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution Resolution 1.75 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																.	.	.																															.	.	.	.
Query SS confidence																											.	.	.																.	.	.																															.	.	.	.
Query Sequence		W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	V	W	T	I	S	L	I	C	H	D	Y	.	.	.	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	.	.	.	S	A	E	T	L	R	A	Y	T	I	S	S	T	P	G	V	S	E	Y	I	T	L	T	V	R	R	I	D	D	G	.	.	.	.
Query Conservation																											.	.	.																.	.	.																															.	.	.	.
Alig confidence																											.	.	.																.	.	.																	.														.	.	.	.
Template Conservation																																																																.
Template Sequence		R	T	F	V	I	R	E	K	R	P	E	S	D	V	I	T	S	F	I	L	E	P	A	D	G	G	P	V	V	N	F	E	P	G	Q	Y	T	S	V	A	I	D	V	P	A	L	G	L	Q	Q	I	R	Q	Y	S	L	S	D	M	P	N	G	.	R	T	Y	R	I	S	V	K	R	E	G	G	G	P	Q	P	P
Template Known Secondary structure													S	S	S									T	T									T	T										T	T	T	T											S				S	.	S										S		S	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	D	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	A	D	V	R	V	I	Y	N	V	R	T	P	Q	D	V	I	F	A	D
Query Conservation		.
Alig confidence		.																																																													.
Template Conservation																																																															.
Template Sequence		G	Y	V	S	N	L	L	H	D	H	V	N	V	G	D	Q	V	K	L	A	A	P	Y	G	S	F	H	I	D	V	D	A	K	T	P	I	V	L	I	S	G	G	V	G	L	T	P	M	V	S	M	L	K	V	A	L	Q	A	P	P	R	.	Q	V	V	F	V	H	G	A	R	N	S	A	V	H	A	M	R	D
Template Known Secondary structure														T	T									B		S		S			T	T			S							S	S														T		S	S			.											T	T	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.														.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Query Sequence		E	W	R	N	Y	P	V	T	L	V	A	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	P	D	L	A	S	R	T	V	M	T	C	G	P	A	P	Y	M	D	W	V	E	Q	E	V	K	A	L	G	V	T	.	.	R	F	F
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Template Conservation
Template Sequence		R	L	R	E	A	A	K	T	Y	E	N	L	D	L	F	V	F	Y	D	Q	P	L	P	E	D	V	Q	G	R	D	Y	D	Y	P	G	L	V	D	V	K	Q	I	E	K	S	I	L	L	P	D	A	D	Y	Y	I	C	G	P	I	P	F	M	R	M	Q	H	D	A	L	K	N	L	G	I	H	E	A	R	I	H
Template Known Secondary structure											T	T								S	S			T	T			B	T	T	T	B	S			S	S			T	T	T	S							T	T							S	S													T	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		224	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	K	F	F	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	V	F	G	P	D
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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