Job Description P75824 Confidence 100.00% Date Thu Jan 5 12:14:39 GMT 2012 Rank 20 Aligned Residues 216 % Identity 17% Template c1cneA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrate reductase; PDBTitle: structural studies on corn nitrate reductase: refined2 structure of the cytochrome b reductase fragment at 2.53 angstroms, its adp complex and an active site mutant and4 modeling of the cytochrome b domain Resolution 3.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.									.	.	.
Predicted Secondary structure																											.	.	.																			.																							.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.																			.																							.	.	.	.	.	.	.	.
Query Sequence		W	R	M	Q	V	H	H	I	T	Q	E	T	P	D	V	W	T	I	S	L	I	C	H	D	Y	.	.	.	Y	P	Y	R	A	G	Q	Y	A	L	V	S	V	R	N	S	A	E	.	T	L	R	A	Y	T	I	S	S	T	P	G	V	S	E	Y	I	T	L	T	V	R	.	.	.	.	.	.	.	.	R	I	D
Query Conservation																											.	.	.																			.																							.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																			.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	C	R	L	V	A	K	K	E	L	S	R	D	V	R	L	F	R	F	S	L	P	S	P	D	Q	V	L	G	L	P	I	G	K	H	I	F	V	C	A	T	I	E	G	K	L	C	M	R	A	Y	T	P	T	S	M	V	D	E	I	G	H	F	D	L	L	V	K	V	Y	F	K	N	E	H	P	K	F	P
Template Known Secondary structure													B	T	T									S	S	T	T	S						T	T			B			B			B	T	T	B						B				S		T	T			S											S	S	S		T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		D	G	V	G	S	Q	W	L	T	R	D	V	K	R	G	D	Y	L	W	L	S	D	A	M	G	E	F	T	C	.	.	.	.	.	.	.	.	.	.	D	D	K	A	E	D	K	F	L	L	L	A	A	G	C	G	V	T	P	I	M	S	M	R	R	W	L	A	K	N	R	P	Q	A	.	.	D	V	R	V	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		N	G	G	L	M	T	Q	Y	L	D	S	L	P	V	G	S	Y	I	D	V	K	G	P	L	G	H	V	E	Y	T	G	R	G	S	F	V	I	N	G	K	Q	R	N	A	R	R	L	A	M	I	C	G	G	S	G	I	T	P	M	Y	Q	I	I	Q	A	V	L	R	D	Q	P	E	D	H	T	E	M	H	L	V
Template Known Secondary structure		T											S		T	T				B							S					S	S	S					S	S	S					S								S	S		S													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.													.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.																			.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.																			.
Query Sequence		Y	N	V	R	T	P	Q	D	V	I	F	A	D	E	W	R	N	Y	P	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	N	N	V	T	E	G	F	I	A	G	R	L	T	R	E	L	L	A	G	V	.	.	P	D	L	A	S	R	T	V	M	T	C	G	P	A	P	Y	M	D	.	W	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.																			.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.																			.
Template Conservation
Template Sequence		Y	A	N	R	T	E	D	D	I	L	L	R	D	E	L	D	R	W	A	A	E	Y	P	D	R	L	K	V	W	Y	V	I	D	Q	V	K	R	P	E	E	G	W	K	Y	S	V	G	F	V	T	E	A	V	L	R	E	H	V	P	E	G	G	D	D	T	L	A	L	A	S	G	P	P	P	M	I	Q	F	A	I
Template Known Secondary structure					S	B	T	T			T	T	S					T					S	T	T	T								S	B		S		T	T	T				S	B		S	S								T	T	S				T	T	T							S		T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		211	.	.	.	.	.	.	.	.	220			.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		E	Q	E	V	K	A	L	G	V	T	.	.	R	F	F	K	E
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		S	P	N	L	E	K	M	K	Y	D	M	A	N	S	F	V	V
Template Known Secondary structure		S	S					T	T			S	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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