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Job DescriptionP03018
Confidence99.72%DateThu Jan 5 10:57:53 GMT 2012
Rank25Aligned Residues164
% Identity27%Templated1w36d1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20 .........30.........40.........50.........60.........70.........
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Query Sequence  SLNDKQREAVAA. . PRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMG. . . . . . .
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Template Sequence  DEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDE
Template Known Secondary structure  TS

TBS

TTSTT
SS



BSSTSS

S
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   80.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  . TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH
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Template Sequence  QKKRIPEDASTLHRL. . . . . . . . . . . LHAGNPLH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


S
S


BTTTS
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TTS

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   229230.........240... ......250.
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  IQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDVLVVDEASMIDLPMMSRLIDALP
Template Known Secondary structure  .......................................................
S
SGGG
BT

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   263......270.........280.......
 
   239240.........250.........260......... 270.........280....
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Query Sequence  DTGKVMIVGDDDQSIYGWRGAQVENIQRFLN. . . . . . . . . . . . . . . . . . . . . . . . . . . DFPGAETIRLEQNYR
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Template Sequence  DHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR
Template Known Secondary structure  TT

TTSGGGTSTTB
GGGGTT


SSS




STTTTTT





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   288.290.........300.........310.........320.........330.........340.........350.........360
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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