Job Description P03018 Confidence 94.43% Date Thu Jan 5 10:57:53 GMT 2012 Rank 367 Aligned Residues 101 % Identity 22% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																								.	.	.																	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.																	.	.	.	.	.	.	.
Query Sequence		Q	R	E	A	V	A	A	P	R	S	N	L	L	V	L	A	G	A	G	S	G	K	T	R	V	L	V	H	R	I	A	W	L	M	S	V	E	N	C	S	P	Y	S	I	M	A	V	T	F	T	N	K	A	A	.	.	.	A	E	M	R	H	R	I	G	Q	L	M	G	T	S	Q	G	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.																	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.													.	.	.																	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		Q	L	M	G	G	V	A	L	H	D	G	N	I	A	E	M	K	T	G	E	G	K	T	L	T	S	T	L	P	V	Y	L	N	A	L	T	G	K	.	.	.	.	G	V	H	V	V	T	V	N	E	Y	L	A	S	R	D	A	E	Q	M	G	K	I	F	E	F	L	G	L	T	V	G	L	N	L	N	S	M	S
Template Known Secondary structure		T										S	S					S	S	S	S		T													T	T	S	S	.	.	.	.							S												T							T	T					B			S	S
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
												84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	M	W	V	G	T	F	H	G	L	A	H	R	L	L	R	A	H	.	.	.	.	.	H	M	D	A	N	L	P	Q	D	F	Q	I	L	D	S	E	D
Query Conservation		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		K	D	E	K	R	E	A	Y	A	A	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	L	Y	K	E	Q	M	V	Q	R	P	L	H	F	A	V	I	D	E	V	D
Template Known Secondary structure		S	S								S	S																T	T	T		S		S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions