Job Description P03018 Confidence 95.77% Date Thu Jan 5 10:57:53 GMT 2012 Rank 228 Aligned Residues 68 % Identity 13% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		A	P	R	S	N	L	L	V	L	A	G	A	G	S	G	K	T	R	V	L	V	H	R	I	A	W	L	M	S	V	E	N	C	S	P	Y	S	I	M	A	V	T	F	T	N	.	.	.	.	.	.	.	K	A	A	A	E	M	R	H	R	I	G	Q	L	M	G	T	S	Q	G	G	M	W	V	G	T	F	H	G
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																			.														.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																			.														.	.	.	.	.	.
Template Sequence		K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	.	L	I	A	R	A	V	A	N	E	T	G	A	F	.	.	.	.	.	.	F	F	L	I	N	G	P	E	I	M	S	K	L	A	G	E	S	E	S	N	L	R	K	A	F	E	E	A	E	K	N	A	P	A	I	I	F	I	D	E	L	D	A
Template Known Secondary structure											S		T	T	S				.											T			.	.	.	.	.	.						T	T					S		T	T																T		S							T	G	G	G
Template Predicted Secondary structure																			.														.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		93	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		309	310

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions