Job Description P03018 Confidence 98.14% Date Thu Jan 5 10:57:53 GMT 2012 Rank 49 Aligned Residues 93 % Identity 17% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	R	S	N	L	L	V	L	A	G	A	G	S	G	K	T	R	V	L	V	H	R	I	A	W	L	M	S	V	E	N	C	S	P	Y	S	I	M	A	V	T	F	T	N	K	A	A	A	E	M	R	H	R	I	G	Q	L	M	G	.	.	.	.	.	.	.	.	.	.	.	T	S	Q	G	G	M	W	V	G
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	.	.	.	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M
Template Known Secondary structure		S	T	T									T	T	T			T	T	T												T	T		.	.	.							S	S											T	T	T	S							T	T		S						S	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	H	G	L	A	H	R	L	L	R	A	H	H	M	D	A	N	L	P	Q	D	F	Q	I	L	D	S	E	D
Query Conservation
Alig confidence			.																		.	.
Template Conservation			.																		.	.
Template Sequence		C	.	H	A	T	F	T	T	R	L	L	S	S	T	R	V	P	N	Y	.	.	N	L	I	V	M	D	E	A	H
Template Known Secondary structure			.												S						.	.	S						S	T	T
Template Predicted Secondary structure			.																		.	.
Template SS confidence
		261		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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