Return to main results Retrieve Phyre Job Id

Job DescriptionP03018
Confidence94.79%DateThu Jan 5 10:57:53 GMT 2012
Rank347Aligned Residues103
% Identity12%Templatec1q57G_
PDB info PDB header:transferaseChain: G: PDB Molecule:dna primase/helicase; PDBTitle: the crystal structure of the bifunctional primase-helicase of2 bacteriophage t7
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  PRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRA
Query Conservation       

 
 





  
  


 

         

 



  

 

  

   
        
 



    


 
Alig confidence 































...












































Template Conservation   


  
 
  
 




   

   
   
 ... 
   
 
        

                           
Template Sequence  GGEVIMVTSGSGMVMSTFVRQQALQWGTAMGK. . . KVGLAMLEESVEETAEDLIGLHNRVRLRQSDSLKREIIENGKFDQ
Template Known Secondary structure  TT
SS
STTTS

...
TTS
TTS

TT
TS
Template Predicted Secondary structure 













...













Template SS confidence 















































































   304.....310.........320.........330..... ....340.........350.........360.........370.........380
 
   101........110.........120......
Predicted Secondary structure 








Query SS confidence 

























Query Sequence  HHMDANLPQDFQILDSEDQLRLLKRL
Query Conservation              
 
       
   
Alig confidence 

























Template Conservation                       
   
Template Sequence  WFDELFGNDTFHLYDSFETDRLLAKL
Template Known Secondary structure  TTT





Template Predicted Secondary structure 










Template SS confidence 

























   381........390.........400......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions