Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAN3
Confidence99.79%DateThu Jan 5 11:13:21 GMT 2012
Rank18Aligned Residues185
% Identity24%Templated1yrba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140. ........150.........160.........170.........180
Predicted Secondary structure 













.














...
Query SS confidence 




































.






































. . .
Query Sequence  LVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQ. QTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL. . .
Query Conservation    
 
 
 








  

  
     



  
 . 
  

  
   
  
  
 


 
   
  
  

  
...
Alig confidence 




































.






































...
Template Conservation   

 


  







  
            

 
                                            
Template Sequence  MIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMREGYGPNGAIVESYDRLMEK
Template Known Secondary structure 

STTSSTTTS


SS
S

SS

SGGGT

TTT

TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   181........190....... ..200.........210.........220.. .......230...
Predicted Secondary structure  ..........









........










.........



Query SS confidence  . . . . . . . . . .
















. . . . . . . .
























. . . . . . . . .










Query Sequence  . . . . . . . . . . PLDDNGILFIENVGNLV. . . . . . . . CPASFDLGEKHKVAVLSVTEGEDKP. . . . . . . . . LKYPHMFAAAS
Query Conservation  ..........     
 
 

 

 

........ 

   

    
 
  
 

 
  ......... 
       

Alig confidence  ..........
















........
























.........










Template Conservation                         
                       
 
                              
Template Sequence  FNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATT
Template Known Secondary structure 
S

SSSTSSS

GGG

STS
Template Predicted Secondary structure 


























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   234.....240......... 250.........260.........270.........280.......
Predicted Secondary structure 








..........................










Query SS confidence 















. . . . . . . . . . . . . . . . . . . . . . . . . .





































Query Sequence  LMLLNKVDLLPYLNFD. . . . . . . . . . . . . . . . . . . . . . . . . . VEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQ
Query Conservation 





 

      
..........................           

   
  


 



   
   
   
Alig confidence 















..........................





































Template Conservation 
 
 

 
                                                  

 


  
 

  
   
 
 
Template Sequence  IPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLAYEH
Template Known Secondary structure 

GGG




SS






TTT
TT
Template Predicted Secondary structure 

















Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   288.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  RC
Query Conservation 
 
Alig confidence 

Template Conservation    
Template Sequence  YC
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   241.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions