Job Description P0AAN3 Confidence 99.07% Date Thu Jan 5 11:13:21 GMT 2012 Rank 155 Aligned Residues 128 % Identity 21% Template c3mcaA_ PDB info PDB header:translation regulation/hydrolase Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	P	V	V	H	L	V	V	T	G	H	V	D	S	G	K	S	T	M	L	G	R	I	M	F	E	L	G	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S	S	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																	.	.	.																												.	.	.	.												.
Query SS confidence																	.	.	.																												.	.	.	.												.
Query Sequence		P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	.	.	.	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	.	.	.	.	L	K	Y	P	H	M	F	A	A	A	S	.	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K
Query Conservation																	.	.	.																												.	.	.	.												.
Alig confidence		.	.	.	.	.	.	.	.								.	.	.																												.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	G	D	A	P	G	H	R	D	F	I	S	G	M	I	A	A	V	L	V	V	D	S	S	Q	N	N	F	E	R	G	F	L	E	N	G	Q	T	R	E	H	A	Y	L	L	R	A	L	G	I	S	E	I	V	V	S	V	N	K	L	D	L	M	S	W	S	E	D	R	F	Q	E
Template Known Secondary structure		.	.	.	.	.	.	.	.						S	S	S											S									S	S	T	T	S		S		S	S											S	S											G	G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		253	.	.	.	.	.	.	260	.	.	.									.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.															280	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	I	A	C	A	R	E	V	N	P	E	.	.	.	.	.	.	.	.	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	L	N	W	L	E
Query Conservation													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	N	I	V	S	D	F	L	I	K	M	V	G	F	K	T	S	N	V	H	F	V	P	I	S	A	I	S	G	T	N	L	I	Q	K	D	S	S	D	L	Y	K	W	Y	K	G	P	T	L	L	S	A	L	D
Template Known Secondary structure											T	T	T	S				G	G	G								S	S	S		S	S	S		S					G	G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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