Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAN3
Confidence96.94%DateThu Jan 5 11:13:21 GMT 2012
Rank353Aligned Residues46
% Identity17%Templatec3lv8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130. ........140.........150..
Predicted Secondary structure 








.







Query SS confidence 
























.




















Query Sequence  LNLVSSPGSGKTTLLTETLMRLKDS. VPCAVIEGDQQTVNDAARIRA
Query Conservation 
 
 
 








  

  
   .  



  
  
  

  
  
Alig confidence 
























.




















Template Conservation 
 
 
  





 
  

  
                         
Template Sequence  IVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRA
Template Known Secondary structure  STTS
TT


SS
SS
Template Predicted Secondary structure 


















Template SS confidence 














































   6...10.........20.........30.........40.........50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions