Job Description P0AAN3 Confidence 99.48% Date Thu Jan 5 11:13:21 GMT 2012 Rank 43 Aligned Residues 149 % Identity 20% Template c3izyP_ PDB info PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 Resolution 10.80 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	.	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L
Query Conservation																																										.
Alig confidence																												.	.	.	.	.	.	.								.						.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	S	P	V	V	T	I	M	G	H	V	D	H	G	K	T	T	L	L	D	K	L	R	K	T	.	.	.	.	.	.	.	Q	V	A	A	M	E	A	G	G	I	T	Q	H	.	.	.	.	.	.	.	.	I	G	A	F	L	V	S	L	P	S	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B						S	T	T	T	T												.	.	.	.	.	.	.					S	S	S			B				.	.	.	.	.	.	.	.	T	T	S			B		S	S		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																											.	.	.																		.	.	.	.
Query SS confidence																											.	.	.																		.	.	.	.
Query Sequence		P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	.	.	.	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	.	.	.	.	L	K	Y	P	H	M	F	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C
Query Conservation																											.	.	.																		.	.	.	.
Alig confidence		.	.	.	.	.	.																				.	.	.																		.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.																																																																		.	.	.
Template Sequence		.	.	.	.	.	.	I	T	F	L	D	T	P	G	H	A	A	F	S	A	M	R	A	R	G	T	Q	V	T	D	I	V	I	L	V	V	A	A	D	D	G	V	M	K	Q	T	V	E	S	I	Q	H	A	K	D	A	H	V	P	I	V	L	A	I	N	K	C	D	K	A	E	.	.	.	A	D	P	E	K	V
Template Known Secondary structure		.	.	.	.	.	.		B					S	S	S			T	T	T	S	B	B	S	S	S	B	S	B	S	S						B	S	S	S															T	T	T								B	S	G	G	G	T	T	.	.	.	T	S			S	S
Template Predicted Secondary structure		.	.	.	.	.	.																																																																		.	.	.
Template SS confidence
								230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300
		254	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		I	A	C	A	R	E	V	N	P	E	I	.	.	.	.	.	.	.	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L	E	T	Q
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	E	L	L	A	Y	D	V	V	C	E	D	Y	G	G	D	V	Q	A	V	H	V	S	A	L	T	G	E	N	M	M	A	L	A	E	A	T	I	A	L
Template Known Secondary structure		S	S					T	T	S					S	S	S	S								S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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