Job Description P0AAN3 Confidence 98.94% Date Thu Jan 5 11:13:21 GMT 2012 Rank 197 Aligned Residues 146 % Identity 17% Template c3izq1_ PDB info PDB header:ribosomal protein,hydrolase Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome Resolution 9.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.																				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	.	.	.	.	.	.	.	.	M	R	L	K	D	S	V	P	C	A	V	I	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A
Query Conservation																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	F	V	V	L	G	H	V	D	A	G	K	S	T	L	M	G	R	L	L	Y	D	L	N	I	V	N	Q	S	Q	L	R	K	L	Q	R	E	S	E	T	M	G	K	S	S	F	K	F	A	W	I	M	D	Q	T	N	E	E	R	E	R	G	V	T	V	S	I	C	T	S	H	F	S	T	H	R	A	N	F
Template Known Secondary structure										S	S	S											S		S	S		S												S	S		S	S	S	S			S	S	S												T	T	T			S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	.	.	.	.	.	.	.	.	.	.	.	D	K	P	L	K	Y	P
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	V	D	A	P	G	H	R	D	F	V	P	N	A	I	M	G	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	D	M	A	I	L	C	V	D	C	S	T	N	A	F	E	S	G	F	D	L	D	G	Q	T	K	E	H	M	L	L	A
Template Known Secondary structure								S	S	S							T	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									S						T	T			T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																												.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		227	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure								.																													.	.	.	.	.	.	.
Query SS confidence								.																													.	.	.	.	.	.	.
Query Sequence		H	M	F	A	A	A	.	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	.	.	.	.	.	.	.	N	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M
Query Conservation								.																													.	.	.	.	.	.	.
Alig confidence								.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	L	G	I	H	N	L	I	I	A	M	N	K	M	D	N	V	D	W	S	Q	Q	R	F	E	E	I	K	S	K	L	L	P	Y	L	V	D	I	G	F	F	E	D	N	I	N	W	V	P	I	S	G	F	S	G	E	G	V
Template Known Secondary structure			T	T	T											T	T	T	T	T	T																				T			G	G	G								T	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions