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Job DescriptionP0AAN3
Confidence96.86%DateThu Jan 5 11:13:21 GMT 2012
Rank370Aligned Residues190
% Identity17%Templatec3ibgF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120.........130. ........140.........150.........160.........
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Query Sequence  RARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDS. VPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLD. . . . .
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Template Sequence  QSILSQKTLRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDGYSNLSAMEIDPN
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SSSSTTSS


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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   170.........180.........190....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . AQMIADAAPRLPLDDNGILFIENVG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GSIQDLLASQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFSILGAR
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T


TTS
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T
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SSTTTTGGGGT

TTGGG
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   195....200.........210.........220 .........230.. ....... 240.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . NLVCPASFDLGEKHKVAVLSVTEGED. . . . . . . KPLKYPHMFAAA. SLMLLNK. . . . . VD
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Template Sequence  GGLPGGQNIDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFPGCE
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   242.......250.........260.........270..... ....280.....
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Query Sequence  LLPYLNFDVEKCIACAREVNPEIEIILISATSGE. . GMDQWLNWLE
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Template Sequence  QCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSE
Template Known Secondary structure  TTTS

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   285....290.........300.........310.........320.........330
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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