Job Description P0AAN3 Confidence 98.98% Date Thu Jan 5 11:13:21 GMT 2012 Rank 181 Aligned Residues 156 % Identity 16% Template c3c5hA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the ras homolog domain of human grlf12 (p190rhogap) Resolution 1.80 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																.	.	.	.	.	.	.	.	.											.	.	.	.																																				.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.											.	.	.	.																																				.	.	.	.	.	.	.	.
Query Sequence		R	K	Q	L	V	L	N	L	V	S	S	P	G	S	.	.	.	.	.	.	.	.	.	G	K	T	T	L	L	T	E	T	L	.	.	.	.	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.											.	.	.	.																																				.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.											.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	T	Y	N	I	S	V	V	G	L	S	G	T	E	K	E	K	G	Q	C	G	I	G	K	S	C	L	C	N	R	F	V	R	P	S	A	D	E	F	H	L	D	H	T	S	V	L	S	T	S	D	F	G	G	R	V	V	N	N	D	H	F	L	Y	W	G	E	V	S	K	M	H	I	V	E	Q	T	E	F
Template Known Secondary structure			S									S				T	T	T	T	T	T				S												S	T	T	T			S												T	S	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
				161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	D	Q	T	F	Q	P	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	L	Q	P	Y	I	K	R	A	A	A	T	K	L	A	S	A	E	K	L	M	Y	F	C	T	D	Q	L	G	L	E	Q	D	F	E	Q	K	Q	M	P	D
Template Known Secondary structure				T	T	T		S	B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G									T		S					T	T		B					G	G	G	T	T		G	G	G	S				B		G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.																												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
							207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	L	K	Y	P	H	M	F	.	.	.	.	.	.	.	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	P	E	I	E	I	I	L	I	S	A	T	S	G
Query Conservation		.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.	.																					.												.	.
Template Conservation																																																									.												.	.
Template Sequence		G	K	L	L	V	D	G	F	L	L	G	I	D	V	S	R	N	F	D	D	Q	L	K	F	V	S	N	L	Y	N	Q	L	A	K	T	K	K	P	I	V	V	V	L	T	K	C	D	E	G	V	E	R	Y	I	R	.	D	A	H	T	F	A	L	S	K	K	N	.	.	L	Q	V	V	E	T	S	A	R	S	N
Template Known Secondary structure		G														B																				T	T										G	G	G	B							.								T	S	S	S	.	.							B	T	T	T	T
Template Predicted Secondary structure																																																									.												.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	M	D	Q	W	L	N	W	L	E	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	V	D	L	A	F	S	T	L	V	Q	L
Template Known Secondary structure		B	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions