Job Description P0AAN3 Confidence 99.12% Date Thu Jan 5 11:13:21 GMT 2012 Rank 128 Aligned Residues 161 % Identity 14% Template c2xtpA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of nucleotide-free human gimap2, amino2 acid residues 1-260 Resolution 1.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																							.									.	.
Query SS confidence																																							.									.	.
Query Sequence		L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	.	Q	T	V	N	D	A	A	R	.	.	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P
Query Conservation																																							.									.	.
Alig confidence																									.	.	.	.	.										.									.	.																															.	.
Template Conservation																									.	.	.	.	.																																																			.	.
Template Sequence		L	R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	.	.	.	.	.	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	X	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	.	.
Template Known Secondary structure										T	T	S											T	S	.	.	.	.	.			S				T	T	S						S									T	T										G	G	G	G	S	S											.	.
Template Predicted Secondary structure																									.	.	.	.	.																																																			.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	L	K	Y	P	H	M	F	.	.	.	.	.	.	.	.	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	C	Y	L	L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	X	G	H	T	I	V	L	F	T	H	K	E	D	L	N	G	G	S	L	X	D	Y	X	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			S								T	T																			G	G	G	G	G	G								G	G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																			.	.	.
Query SS confidence		.	.	.																			.	.	.
Query Sequence		.	.	.	V	E	K	C	I	A	C	A	R	E	V	N	P	E	I	E	I	I	.	.	.	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L	E	T
Query Conservation		.	.	.																			.	.	.
Alig confidence		.	.	.																			.	.	.
Template Conservation
Template Sequence		D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	I	C	A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	X	D	C	I	E	D
Template Known Secondary structure															T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions