Job Description P0AAN3 Confidence 99.89% Date Thu Jan 5 11:13:21 GMT 2012 Rank 9 Aligned Residues 178 % Identity 21% Template c2wwwB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein Resolution 2.64 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																												.																												.
Query SS confidence																												.																												.
Query Sequence		E	V	E	I	D	V	L	D	K	N	N	R	L	A	E	R	N	R	A	R	F	A	A	R	K	Q	.	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	.	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P
Query Conservation																												.																												.
Alig confidence																												.																												.																.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.
Template Sequence		E	L	A	Q	V	L	L	Q	K	V	L	L	Y	H	R	E	Q	E	Q	S	N	K	G	K	P	L	A	F	R	V	G	L	S	G	P	P	G	A	G	K	S	T	F	I	E	Y	F	G	K	M	L	T	E	R	G	H	K	L	S	V	L	A	V	D	T	E	L	S	R	D	.	.	.	.	.	.	M	N	A	Y
Template Known Secondary structure																					T	T	T	T			S	S									T	T	S	S															T	T												S	S	S		.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	L	K	Y	P	H	M	F	A	A	A	S	L	M	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	P	T	R	T	T	N	.	.	.	.	.	.	.	.	.	.	E	A	I	L	L	C	E	G	A	G	Y	D	I	I	L	I	E	T	V	G	.	.	Q	S	E	F	A	V	A	D	M	V	D	M	F	V	L	L	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	I	I	E	M	A	D	L	V	A
Template Known Secondary structure						T	T			.	.	.	.	.	.	.	.	.	.									T	T		S									.	.								T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.		T	T	S		S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	.	.	.	.	.	.	.	.	.	N	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L	E	T	Q	R
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence													.	.												.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		V	T	K	S	D	G	D	L	I	V	P	.	.	A	R	R	I	Q	A	E	Y	V	S	A	L	K	L	L	R	K	R	S	Q	V	W	K	P	K	V	I	R	I	S	A	R	S	G	E	G	I	S	E	M	W	D	K	M	K	D	F	Q
Template Known Secondary structure						S	T	T	S	S			.	.													T	T	S			S		S	S										T	T	T		T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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