Job Description P0AAN3 Confidence 96.39% Date Thu Jan 5 11:13:21 GMT 2012 Rank 449 Aligned Residues 70 % Identity 20% Template c2wjyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form Resolution 2.50 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																											.	.														.
Query SS confidence																																											.	.														.
Query Sequence		N	N	R	L	A	E	R	N	R	A	R	F	A	A	R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	.	.	K	D	S	V	P	C	A	V	I	E	G	D	Q	.	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V
Query Conservation																																											.	.														.
Alig confidence																	.	.				.																					.	.														.
Template Conservation																	.	.				.
Template Sequence		N	H	S	Q	V	Y	A	V	K	T	V	L	Q	R	P	.	.	L	S	L	.	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L	A	R	Q	G	N	G	P	V	L	V	C	A	P	S	N	I	A	V	D	Q	L	T	E	K	I	H	Q	T	G	L	K	V	V	R	L
Template Known Secondary structure														T	S	S	.	.				.					T	T	S															T	T		S	S							S	S													T	T	T
Template Predicted Secondary structure																	.	.				.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions