Job Description P0AAN3 Confidence 97.62% Date Thu Jan 5 11:13:21 GMT 2012 Rank 304 Aligned Residues 158 % Identity 14% Template c2vedA_ PDB info PDB header:transferase Chain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase; PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein Resolution 2.6 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																														.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	D	K	N	N	R	L	A	E	R	N	R	A	R	F	A	A	R	K	Q	L	V	L	N	L	V	S	.	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	.	V	P	C	A	V	I	E	G	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	E	K	F	R	G	I	R	S	N	I	M	F	A	N	P	D	S	A	V	Q	S	I	V	I	T	S	E	A	P	G	A	G	M	S	T	I	A	A	N	L	A	V	A	Y	A	Q	A	G	Y	K	T	L	I	V	D	G	D	M	R	K	P	T	Q	H	Y	I	F	N	L	P	N	N	E	G	L	S	S	L
Template Known Secondary structure																T	S		S	S										S	S	T	T	S	S															T	T										S	S	S							T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		1021	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100
					142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.																																.	.	.	.																																		.	.
Query SS confidence		.	.	.																																.	.	.	.																																		.	.
Query Sequence		.	.	.	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	.	.	.	.	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	.	.	E	K	H	K	V	A	V
Query Conservation		.	.	.																																.	.	.	.																																		.	.
Alig confidence		.	.	.																																.	.	.	.																																		.	.
Template Conservation
Template Sequence		L	L	N	W	S	T	Y	Q	D	S	I	I	S	T	E	I	E	D	L	D	V	L	T	S	G	P	I	P	P	N	P	S	E	L	I	T	S	R	A	F	A	N	L	Y	D	T	L	L	M	N	Y	N	F	V	I	I	D	T	P	P	V	N	T	V	T	D	A	Q	L	F	S	K	F	T	G	N	V	V	Y	V
Template Known Secondary structure			T	T	S	S										S	S	T	T								S			S							T	S															S									T	T	T		T										S
Template Predicted Secondary structure
Template SS confidence
		1101	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180
		213	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.
Predicted Secondary structure							.																		.	.	.	.
Query SS confidence							.																		.	.	.	.
Query Sequence		L	S	V	T	E	.	G	E	D	K	P	L	K	Y	P	H	M	F	A	A	A	S	L	.	.	.	.	M	L	L	N	K	V	D
Query Conservation							.																		.	.	.	.
Alig confidence							.																		.	.	.	.
Template Conservation
Template Sequence		V	N	S	E	N	N	N	K	D	E	V	K	K	G	K	E	L	I	E	A	T	G	A	K	L	L	G	V	V	L	N	R	M	P
Template Known Secondary structure				T	T	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		1181	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions