Job Description P0AAN3 Confidence 98.98% Date Thu Jan 5 11:13:21 GMT 2012 Rank 179 Aligned Residues 148 % Identity 15% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	K	L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	E	Q	R
Template Known Secondary structure									S	T	T	S	S											S					S					S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																																		.	.	.	.	60
		185	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure												.	.	.																											.	.	.	.	.	.																																.	.	.	.
Query SS confidence												.	.	.																											.	.	.	.	.	.																																.	.	.	.
Query Sequence		N	G	I	L	F	I	E	N	V	G	.	.	.	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	.	.	.	.	.	.	K	P	L	K	Y	P	H	M	F	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	.	.	.	.
Query Conservation												.	.	.																											.	.	.	.	.	.																																.	.	.	.
Alig confidence												.	.	.																											.	.	.	.	.	.																																.	.	.	.
Template Conservation
Template Sequence		V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	C	Y	S	D	S	D	A	V	L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q
Template Known Secondary structure												S	G	G	G	T	T	T	G	G	G	G	G	T	T		S								T	T		T	T	T															T	T	S									G	G	G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
										252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	.	.	.	K	C	I	A	C	A	R	E	V	N	P	E	I	E	I	I	L	I	S	A	T	S	G	E	.	G	M	D	Q	W	L	N	W	L	E	T
Query Conservation		.	.	.	.	.	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.													.												.
Template Conservation																						.
Template Sequence		K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	A	E	.	I	Y	L	E	G	S	A	F	T	S	E	K	S	I	H	S	I	F	R	T	A	S	M
Template Known Secondary structure		T																T	T		S	.							T	T	T
Template Predicted Secondary structure																						.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions