Job Description P0AAN3 Confidence 97.66% Date Thu Jan 5 11:13:21 GMT 2012 Rank 303 Aligned Residues 163 % Identity 15% Template c2qmoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dethiobiotin synthetase; PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori Resolution 1.47 Å

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		106	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure								.																					.																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence								.																					.																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	N	L	V	S	.	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	.	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	.	.	.	.	.	.	.	.	.	.	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	.	.	.	.	.	.	.	.	.
Query Conservation								.																					.																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence								.																					.																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	L	F	I	S	A	T	N	T	N	A	G	K	T	T	C	A	R	L	L	A	Q	Y	C	N	A	C	G	V	K	T	I	L	L	K	P	I	E	T	G	V	N	D	A	I	N	H	S	S	D	A	H	L	F	L	Q	D	N	R	L	L	D	R	S	L	T	L	K	D	I	S	F	Y	R	Y	H	K	V	S	A
Template Known Secondary structure								S	S	T	T	S																T	T												S			T	T	T				S										T	T	T		T	T												S	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
												165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																								.							.	.	.	.	.	.	.														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																								.							.	.	.	.	.	.	.														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	.	L	G	E	K	H	K	.	.	.	.	.	.	.	V	A	V	L	S	V	T	E	G	E	D	K	P	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.																																								.							.	.	.	.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.																					.							.	.	.	.	.	.	.														.	.	.	.
Template Conservation																														.
Template Sequence		P	L	I	A	Q	Q	E	E	D	P	N	A	P	I	D	T	D	N	L	T	Q	R	L	H	N	F	T	K	.	T	Y	D	L	V	I	V	E	G	A	G	G	L	C	V	P	I	T	L	E	E	N	X	L	D	F	A	L	K	L	K	A	K	X	L	L	I	S	H	D	N	L	G	L	I	N	D	C	L	L	N
Template Known Secondary structure											T	T															G	G	G	.	T		S							S	S		T	T		B	S	S	S	S		B									T										S	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Y	P	H	M	F	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	P	E	I	E	I	I	L	I	S
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		D	F	L	L	K	S	H	Q	L	D	Y	K	I	A	I	N	L	K	G	N	N	T	A	F	H	S	I	S	L	P	Y	I	E	L	F	N	T	R	S	.	N	N	P	I	V	I	F	Q
Template Known Secondary structure							T	S	S	S										T	T		S	S					T												.	S	S					G	G
Template Predicted Secondary structure																																									.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions