Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAN3
Confidence100.00%DateThu Jan 5 11:13:21 GMT 2012
Rank1Aligned Residues207
% Identity39%Templatec2hf9A_
PDB info PDB header:hydrolase, metal binding proteinChain: A: PDB Molecule:probable hydrogenase nickel incorporation PDBTitle: crystal structure of hypb from methanocaldococcus2 jannaschii in the triphosphate form
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  IDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVN
Query Conservation    

  
   
   
          
 
 
 








  

  
     



  
  
  

  
   
  
  
 
Alig confidence 















































































Template Conservation    

     
    
          
 


  








 
                                    
Template Sequence  KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLN
Template Known Secondary structure 

TT
STTSSTTT

TTTTTT
Template Predicted Secondary structure 




























Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  TGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVD
Query Conservation 


 
   
  
  

  
     
 
 

 

 

 

   

    
 
  
 

 
   
       







 
Alig confidence 















































































Template Conservation 
 
                         
                       
                           
Template Sequence  TGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKID
Template Known Secondary structure 
TT
SS

TTS
GGG
S

S
SSGGGG


S
SGGG
TTTTTT
TT
S
GG
Template Predicted Secondary structure 

































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   242.......250.........260.........270.........280........
Predicted Secondary structure 


















Query SS confidence 














































Query Sequence  LLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQR
Query Conservation 
      
           

   
  


 



   
   
   
Alig confidence 














































Template Conservation                          

 


 

 

  
   
   
Template Sequence  LADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSV
Template Known Secondary structure  GT


TTS

TTT
TT
Template Predicted Secondary structure 














Template SS confidence 














































   171........180.........190.........200.........210.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions