Job Description P0AAN3 Confidence 99.34% Date Thu Jan 5 11:13:21 GMT 2012 Rank 67 Aligned Residues 139 % Identity 15% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G
Query Conservation
Alig confidence																							.														.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																							.														.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	K	K	.	G	T	S	S	D	I	T	X	Y	N	N	D	K	.	.	.	.	.	.	.	.	.	.	.	E	G	R	N	X	V	F	V	D	A	H	S	Y	P	K	T	L	K	S	L	I	T	A	L	N	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	T	T	S	S							T	T	S			.				S	S	S							S	.	.	.	.	.	.	.	.	.	.	.	S	S	S								T	T	T	T	T											.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.														.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	L	K	Y	P	H	M	F	A	A	A	S	.	.	.	.	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	P
Query Conservation																																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	D	I	A	V	L	C	I	P	P	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	H	A	.	.	I	D	E	L	K	A	K	L	K	V	I	T	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S								T	T																T	T											G	G	G	S					.	.												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template SS confidence
																				63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.
							263	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.													.	.	.	.	.
Query SS confidence		.	.	.	.	.													.	.	.	.	.
Query Sequence		.	.	.	.	.	E	I	E	I	I	L	I	S	A	T	S	G	.	.	.	.	.	E	G	M	D	Q	W	L	N	W	L	E	T
Query Conservation		.	.	.	.	.													.	.	.	.	.
Alig confidence		.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K	S	A	K	N	P	F	E	G	V	D	E	L	K	A	R	I	N	E
Template Known Secondary structure		T	S	T	T	T	T										T	T	S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions