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Job DescriptionP0AAN3
Confidence99.08%DateThu Jan 5 11:13:21 GMT 2012
Rank152Aligned Residues177
% Identity14%Templatec2dwqB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:gtp-binding protein; PDBTitle: thermus thermophilus ychf gtp-binding protein
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150. ........160.........170......
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Query Sequence  LVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIR. . . . . . . . ATGTPAIQVNTGKGCHLDAQMIADA
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Template Sequence  LAVGIVGLPNVGKSTLFNALTRANALAKNVGVVPLEDERLYALQRTFAKGERVPPVVPTHVEFVDIAGLV. . . . . . . NQF
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   2.......10.........20.........30.........40.........50.........60.........70. ...
 
   177..180.........190....... ..200.........210....
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Query Sequence  APRLPLDDNGILFIENVGNLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CPASFDLGEKHKVAVLS
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Template Sequence  LAHIREVAAIAHVLRCFPDPLEDAEVVETELLLADLATLERRLERLRKEARADRERLPLLEAAEGLYVHLQEGKPARTFP
Template Known Secondary structure  SS





SGGGTT

GGGS
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   215....220. ........230.........240.........250.........260. ........270..
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Query Sequence  VTEGEDK. PLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVN. . PEIEIILISAT. . . . . . . . . . . . . . . . . . .
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Template Sequence  PSEAVARFLKETPLLTAKPVIYVANVAE. EDLPDGRGNPQVEAVRRKALEEGAEVVVVSARLEAELAELSGEEARELLAA
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SSTTS

GGGS




T.TTTTTTTT
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B


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   185....190.........200.........210.. .......220.........230.........240.........250.........260...
 
   273......280.........
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Query Sequence  . . . SGEGMDQWLNWLETQRC
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Template Conservation         
  
       
 
Template Sequence  YGLQESGLQRLARAGYRALD
Template Known Secondary structure  TT
SS
TT
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   264.....270.........280...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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