|   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | |
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|
| . |
|
|
|  |  | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | R | K | Q | L | V | L | N | L | V | S | S | P | G | S | G | K | T | T | L | L | T | E | T | L | M | R | L | K | D | S | . |
V | P | C | A | V | I | E | G | D | Q | . |
Q | T | V | N | D | . |
. |
A | A | R | I | R | A | T | G | T | P | A | I | Q | V | N | T | G | K | G | C | H | L | D | A | Q | M | I | A | D |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   | . |   |   |
|
|
|
|   |   |
|   | . |   |
|   |   |
| . | . |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
E | R | K | E | X | L | R | F | L | T | C | G | N | V | D | D | G | K | S | T | L | I | G | R | L | L | H | D | S | K | X | I | G | D | D | L | A | L | L | V | D | G | L | Q | A | I | T | I | D | V | A | Y | R | Y | F | S | T | A | K | R | K | F | I | I | A | D | T | P | G | H | E | Q | Y | T | R | N | X | A | T | G |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
|
|
| S | G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
. | . | . | . | . | . | . | 230 | . | . | |
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | P | R | L | P | L | D | D | N | G | I | L | F | I | E | N | V | G | N | L | V | C | P | A | S | F | D | L | G | E | K | H | K | V | A | V | L | S | V | T | E | G | E | D | K | P | . |
. |
. |
. |
L | K | Y | P | H | M | F | A | A | A | . |
S | L | M | L | L | N | K | V | D | L | L | P | Y | L | N | F | D | V |
Query Conservation |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
|
|   |
|   |   | . | . | . | . |   |
|   |   |   |   |   |   |   |
| . |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | C | D | L | A | I | I | L | V | D | A | R | Y | G | V | Q | T | Q | T | R | R | H | S | Y | I | A | S | L | L | G | I | K | H | I | V | V | A | I | N | K | X | D | L | N | G | F | D | E | R | V | F |
Template Known Secondary structure |   |
 | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |
| S |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| T | T | T | T | T | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | C | I | A | C | A | R | E | V | . |
. |
. |
. |
. |
. |
. |
N | P | E | I | E | I | I | L | I | S | A | T | S | G | E | G | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |
|
|
Template Sequence |   |
E | S | I | K | A | D | Y | L | K | F | A | E | G | I | A | F | K | P | T | T | X | A | F | V | P | X | S | A | L | K | G | D | N | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |  |  |  |  |  |  |
|
| T | T | T |
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
  |