Job Description P0AAN3 Confidence 99.34% Date Thu Jan 5 11:13:21 GMT 2012 Rank 71 Aligned Residues 147 % Identity 22% Template c1skqB_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp Resolution 1.80 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																						.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	G	T	P	A	I	Q	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		K	P	H	L	N	L	I	V	I	G	H	V	D	H	G	K	S	T	L	V	G	R	L	L	M	D	R	G	.	.	.	.	.	F	I	D	E	K	T	V	K	E	A	E	E	A	A	K	K	L	G	K	E	S	E	K	F	A	F	L	L	D	R	L	K	E	E	M	R	F	E	T	K	K	Y	F	F	T	I	I
Template Known Secondary structure												S	T	T	S	S													B	.	.	.	.	.				S	S												T	T		T	T												T							S	S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	.	.	.	.	.	.	.	.	.	.	.	E	D	K	P	L	K	Y	P	H	M	F
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	P	G	H	R	D	F	V	K	N	M	I	T	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	D	A	A	I	L	V	V	S	A	K	K	G	E	Y	E	A	G	M	S	V	E	G	Q	T	R	E	H	I	I	L	A	K	T	M
Template Known Secondary structure				T	T	S	T	T								S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									S	T	T						S	S	S	S													T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																												.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		230	.		.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure				.													.	.																			.	.	.	.	.	.	.
Query SS confidence				.													.	.																			.	.	.	.	.	.	.
Query Sequence		A	A	.	A	S	L	M	L	L	N	K	V	D	L	L	.	.	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	.	.	.	.	.	.	.	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W
Query Conservation				.													.	.																			.	.	.	.	.	.	.
Alig confidence				.													.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	D	Q	L	I	V	A	V	N	K	M	D	L	T	E	P	P	Y	D	E	K	R	Y	K	E	I	V	D	Q	V	S	K	F	M	R	S	Y	G	F	N	T	N	K	V	R	F	V	P	V	V	A	P	S	G	D	N	I	T	H	K
Template Known Secondary structure		T											G	G	G	S	S	S	T	T																			T	T				T	T							B	T	T	T	T	B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions