Job Description P0AAN3 Confidence 98.89% Date Thu Jan 5 11:13:21 GMT 2012 Rank 217 Aligned Residues 159 % Identity 15% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																																																																																.	.
Template Sequence		Q	A	E	V	N	I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	F	L	R	R	V	S	F	V	D	S	P	G	.	.
Template Known Secondary structure											S		T	T	S	S										S																						T	T	T					S	S	S	B		T	T	S			B													S	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																										.	.	.	.	.										.
Query SS confidence																																																										.	.	.	.	.										.
Query Sequence		H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	.	.	.	.	.	L	K	Y	P	H	M	F	A	A	.	A	S	L	M	L	L	N	K	V
Query Conservation																																																										.	.	.	.	.										.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.										.
Template Conservation		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	H	E	T	L	M	A	T	M	L	S	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I
Template Known Secondary structure		.	.										T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S								T	T	S		S	S														T	T											T
Template Predicted Secondary structure		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				120	.	.	.	.	.	.	.	.	.	130	.	.																								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L	E	T	Q	R	C	A
Query Conservation
Alig confidence									.	.																	.
Template Conservation									.	.																	.
Template Sequence		D	L	V	D	E	K	Q	.	.	A	E	E	N	Y	E	Q	I	K	E	F	V	K	G	T	I	.	A	E	N	A	P	I	I	P	I	N	I	D	V	L	L	K	A	I	Q	D	F	I	P	T
Template Known Secondary structure		T	S	S		T	T	T	.	.	T	T	T										T	T	S	T	.	T	T	T																			S
Template Predicted Secondary structure									.	.																	.
Template SS confidence
		175	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions