Job Description P0AAN3 Confidence 99.07% Date Thu Jan 5 11:13:21 GMT 2012 Rank 154 Aligned Residues 154 % Identity 16% Template c1m2oD_ PDB info PDB header:protein transport/signaling protein Chain: D: PDB Molecule:gtp-binding protein sar1; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D	N
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		K	L	L	F	L	G	L	D	N	A	G	K	T	T	L	L	H	M	L	K	N	D	.	.	.	.	.	.	.	R	L	A	T	L	Q	P	T	W	H	P	T	S	E	E	L	A	I	G	N	I	K	F	T	T	F	D	L	G	G	H	I	.	.	.	.	Q	A	R	R	L	W	K	D	Y	F	P	E	V	N	G
Template Known Secondary structure								S	T	T	S	S										T	S	.	.	.	.	.	.	.										S									S	S	S										S	S	.	.	.	.	G	G	G	G	T						T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	L	K	Y	P	H	M	F	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	N	.	F	D	V	E	K	C	I	A	C	A	R	E	V	N	P	E	I
Query Conservation																																																																.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	F	L	V	D	A	A	D	P	E	R	F	D	E	A	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	D	A	L	F	N	I	A	E	L	K	D	V	P	F	V	I	L	G	N	K	I	D	A	P	N	A	V	S	E	A	E	L	R	S	A	L	G	L	L	N	T	T	G	R	P	V
Template Known Secondary structure								T	T		G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.							T		G	G	G	T	T			B			B				T	T	S	T	T											T	T		S	S						B
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	F	M	C	S	V	V	M	R	N	G	Y	L	E	A	F	Q	W	L
Template Known Secondary structure				B			B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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