Job Description P0AAN3 Confidence 99.58% Date Thu Jan 5 11:13:21 GMT 2012 Rank 25 Aligned Residues 174 % Identity 17% Template c1kk3A_ PDB info PDB header:translation Chain: A: PDB Molecule:eif2gamma; PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+ Resolution 1.90 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L
Query Conservation
Alig confidence																													.	.	.	.	.															.	.	.	.	.
Template Conservation																													.	.	.	.	.															.	.	.	.	.
Template Sequence		R	Q	A	E	V	N	I	G	M	V	G	H	V	D	H	G	K	T	T	L	T	K	A	L	T	G	V	.	.	.	.	.	W	T	D	S	E	E	L	R	R	G	I	T	I	K	.	.	.	.	.	I	G	F	A	D	A	E	I	R	R	C	P	N	C	G	R	Y	S	T	S	P	V	C	P	Y	C	G	H	E
Template Known Secondary structure			S									S	S	T	T	S	S										T		.	.	.	.	.						T	T	S	S		S	S	S		.	.	.	.	.												T	T	T					S	S	S	B		T	T	T			B
Template Predicted Secondary structure																													.	.	.	.	.															.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																.	.	.																													.	.	.	.	.													.
Query SS confidence																.	.	.																													.	.	.	.	.													.
Query Sequence		P	L	D	D	N	G	I	L	F	I	E	N	V	G	.	.	.	N	L	V	C	P	A	S	F	D	L	G	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	.	.	.	.	.	L	K	Y	P	H	M	F	A	A	A	S	L	.	M	L	L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E
Query Conservation																.	.	.																													.	.	.	.	.													.
Alig confidence																.	.	.																													.	.	.	.	.													.														.	.
Template Conservation																																																																														.	.
Template Sequence		T	E	F	V	R	R	V	S	F	I	D	A	P	G	H	E	A	L	M	T	T	M	L	A	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	R	P	Q	T	R	E	H	L	M	A	L	Q	I	I	G	Q	K	N	I	I	I	A	Q	N	K	I	E	L	V	D	K	E	K	.	.	A	L
Template Known Secondary structure														S	S												G	G	G		S								T	T	S		S																T											G	G	G	S					.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.
		252	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		K	C	I	A	C	A	R	E	.	.	.	.	.	V	N	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L	E	T
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		E	N	Y	R	Q	I	K	E	F	I	E	G	T	V	A	E	N	A	P	I	I	P	I	S	A	L	H	G	A	N	I	D	V	L	V	K	A	I	E	D
Template Known Secondary structure												T	T	S	T	T	T	T							B	T	T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions