Job Description P0AAN3 Confidence 99.58% Date Thu Jan 5 11:13:21 GMT 2012 Rank 24 Aligned Residues 163 % Identity 22% Template c1g7tA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor if2/eif5b; PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp Resolution 2.00 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D	A	A	P	R	L	P	L	D	D
Query Conservation
Alig confidence																													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	V	S	V	L	G	H	V	D	H	G	K	T	T	L	L	D	H	I	R	G	S	A	V	A	S	.	.	.	R	I	T	Q	H	I	G	A	T	E	I	P	M	D	V	I	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	D	F	L	K	K	F	S	I	R	E	T	L
Template Known Secondary structure									S	T	T	S	S														T	T	.	.	.						T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	T	T		G	G	G	G	T
Template Predicted Secondary structure																													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																		.	.	.	.	.	.	.	.	60	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																		.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																		.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	.	.	.	E	K	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	.	.	.	.	L	K	Y	P	H	M	F	A	A	A	S	L	M	L	L	N	K	V	D	L	L	P	Y	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.																		.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																		.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	L	F	F	I	D	T	P	G	H	E	A	F	T	T	L	R	K	R	G	G	A	L	A	D	L	A	I	L	I	V	D	I	N	E	G	F	K	P	Q	T	Q	E	A	L	N	I	L	R	M	Y	R	T	P	F	V	V	A	A	N	K	I	D	R	I	H	G	W	R	V	H	E	G	R	P	F	M	E	T
Template Known Secondary structure											T	T	T		G	G	G	S			T	T			S		S								T	T	T																T	T										G	G	G	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
														247	.	.	250	.	.	.	.	.	.	.	.	.	260	.														.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W	L	N	W	L	E	T	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	K	Q	D	I	Q	V	Q	Q	K	L	D	T	K	V	Y	E	L	V	G	K	L	H	E	E	G	F	E	S	E	R	F	D	R	V	T	D	F	A	S	Q	V	S	I	I	P	I	S	A	I	T	G	E	G	I	P	E	L	L	T	M	L	M	G	L
Template Known Secondary structure			T	T	S																						T	T						T	T	T		S		T	T	T	S								S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions