 |
Job Description | P0AEG8 | Confidence | 3.21% | Date | Thu Jan 5 11:23:17 GMT 2012 |
Rank | 80 | Aligned Residues | 26 |
% Identity | 15% | Template | c3cw1W_ |
PDB info |
PDB header:splicing | Chain: W: PDB Molecule:small nuclear ribonucleoprotein e; |
PDBTitle: crystal structure of human spliceosomal u1 snrnp
|
Resolution | 5.49 Å |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | N | D | R | V | T | V | K | T | D | G | G | P | R | R | P | G | V | V | L | A | V | E | E | F |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
Template Sequence |   |
R | S | R | I | Q | V | W | L | Y | E | Q | V | N | M | R | I | E | G | C | I | I | G | F | D | E | Y |
Template Known Secondary structure |   |
 | T | T |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|