Job Description P0A9A2 Confidence 99.45% Date Thu Jan 5 11:09:45 GMT 2012 Rank 58 Aligned Residues 139 % Identity 14% Template c2z90D_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence		A	T	A	G	M	L	L	K	L	N	S	Q	M	N	R	E	F	Y	A	S	N	L	Y	L	H	L	S	N	W	C	S	E	Q	S	L	N	G	T	A	T	F	L	R	A	Q	A	Q	S	N	V	T	Q	M	M	R	M	F	N	F	M	K	S	V	G	A	T	P	I	.	.	.	.	.	.	.	.	V	K	A	I
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	P	E	F	G	G	N	L	Q	K	V	L	V	D	L	I	E	L	S	L	Q	G	K	Q	A	H	W	N	V	V	G	S	N	F	R	D	L	H	L	Q	L	D	E	L	V	D	F	A	R	E	G	S	D	T	I	A	E	R	M	R	A	L	D	A	V	P	D	G	R	S	D	T	V	A	A	T	T	T	L
Template Known Secondary structure																																	S	T	T																													T	T																S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	G	E	K	L	N	S	L	E	E	L	F	Q	K	T	M	E	E	Y	E	Q	R	S	S	T	L	A	Q	L	A	D	E	A	K	E	L	N	D	D	S	T	V	N	F	L	R	D	L	E	K	E	Q	Q	H	D	G	L	L	L	Q	T	I	L	D	E	V	R	S	A
Query Conservation
Alig confidence																																							.															.	.	.
Template Conservation																																							.															.	.	.
Template Sequence		P	E	F	P	A	F	E	R	S	T	A	D	V	V	D	L	I	T	T	R	I	N	A	T	V	D	T	I	R	R	V	H	D	A	V	D	A	.	E	D	P	S	T	A	D	L	L	H	G	L	I	D	.	.	.	G	L	E	K	Q	A	W	L	I	R	S	E	N	R	K	V
Template Known Secondary structure							S																																.															.	.	.											G	G	G
Template Predicted Secondary structure																																							.															.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions