Job Description P0A9A2 Confidence 20.52% Date Thu Jan 5 11:09:45 GMT 2012 Rank 105 Aligned Residues 80 % Identity 15% Template c2dl1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:spartin; PDBTitle: solution structure of the mit domain from human spartin Resolution UNK

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	R	E	F	Y	A	S	N	L	Y	L	H	L	S	N	W	C	S	E	Q	S	L	N	G	T	A	T	F	L	R	A	Q	A	Q	S	N	V	T	Q	M	M	R	M	F	N	F	M	K	S	V	G	A	T	P	I	V	K	A	I	D	V	P	G	E	K	L	N	S	L	E	E	L	F	Q	K	T	M	E	E
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	E	A	Y	K	K	A	F	L	F	V	N	K	G	L	N	T	D	E	L	G	Q	K	E	E	A	K	N	Y	Y	K	Q	G	I	G	H	L	L	R	G	I	.	.	.	.	.	.	.	.	.	.	.	S	I	S	S	K	E	S	E	H	T	G	P	G	W	E	S	A	R	Q	M	Q	Q	K	M	K	E	T
Template Known Secondary structure																							T																					.	.	.	.	.	.	.	.	.	.	.	S	S					T	T				S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		94	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	Q	R	S	S	T	L	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	N	V	R	T	R	L	E	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions