Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC59
Confidence99.95%DateThu Jan 5 11:17:15 GMT 2012
Rank45Aligned Residues183
% Identity17%Templatec3lypA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:stringent starvation protein a; PDBTitle: structure of stringent starvation protein a homolog from pseudomonas2 fluorescens
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTG
Query Conservation 



     

  


  
   

  
                
   

 
   

  
 

  
  

           
Alig confidence 






























..


















..

























Template Conservation 
 

    

   



 
   

 

   
..            
  
   ..    
  
  
   
           
Template Sequence  LACYSDPADHYSHRVRIVLAEKGVSAEIISV. . EQPPKLIEVNPYGSLPTLV. . DRLALWESTVVXEYLDERYPHPPLLP
Template Known Secondary structure 

TT
T



..



TT

SS..


SS
SS

S
Template Predicted Secondary structure 








..













..










Template SS confidence 















































































   910.........20.........30......... 40.........50........ .60.........70.........80....
 
   81........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 





.
Query SS confidence 














































































.
Query Sequence  KRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIV.
Query Conservation                                                                                 .
Alig confidence 





























.......................

























.
Template Conservation                                .......................                           
Template Sequence  VYPVARANSRLLIHRIQRDWCGQVDLILDP. . . . . . . . . . . . . . . . . . . . . . . RTKEAARVQARKELRESLTGVSPLFAD
Template Known Secondary structure  SST
T.......................TS
GGGGGT
Template Predicted Secondary structure 





.......................





Template SS confidence 















































































   8990.........100.........110........ .120.........130.........140.....
 
   160.........170.........180..... ....190.........200.........210
Predicted Secondary structure 










..










Query SS confidence 

























. .
























Query Sequence  KPNAVNGELSEDDIQLFPLLRNLTLV. . AGINWPSRVADYRDNMAKQTQINLL
Query Conservation     
 
   
 


 
   
      ..      
 
 

  
      
   
Alig confidence 

























..
























Template Conservation     
 
   
 


 
   
              
 
  
  
   

     
Template Sequence  KPFFLSEEQSLVDCCLLPILWRLPVLGIELPRQAKPLLDYXERQFAREAFQAS
Template Known Secondary structure  SSBTTBSS

TTTTTT



GGGS
Template Predicted Secondary structure 




















Template SS confidence 




















































   146...150.........160.........170.........180.........190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions