Job Description P0AC59 Confidence 99.95% Date Thu Jan 5 11:17:15 GMT 2012 Rank 45 Aligned Residues 183 % Identity 17% Template c3lypA_ PDB info PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: structure of stringent starvation protein a homolog from pseudomonas2 fluorescens Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	Y	I	Y	D	H	C	P	Y	C	L	K	A	R	M	I	F	G	L	K	N	I	P	V	E	L	H	V	L	L	N	D	D	A	E	T	P	T	R	M	V	G	Q	K	Q	V	P	I	L	Q	K	D	D	S	R	Y	M	P	E	S	M	D	I	V	H	Y	V	D	K	L	D	G	K	P	L	L	T	G
Query Conservation
Alig confidence																																	.	.																				.	.
Template Conservation																																	.	.																				.	.
Template Sequence		L	A	C	Y	S	D	P	A	D	H	Y	S	H	R	V	R	I	V	L	A	E	K	G	V	S	A	E	I	I	S	V	.	.	E	Q	P	P	K	L	I	E	V	N	P	Y	G	S	L	P	T	L	V	.	.	D	R	L	A	L	W	E	S	T	V	V	X	E	Y	L	D	E	R	Y	P	H	P	P	L	L	P
Template Known Secondary structure								T	T															T									.	.											T	T			S	S				.	.							S												S		S	S			S
Template Predicted Secondary structure																																	.	.																				.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	R	S	P	A	I	E	E	W	L	R	K	V	N	G	Y	A	N	K	L	L	L	P	R	F	A	K	S	A	F	D	E	F	S	T	P	A	A	R	K	Y	F	V	D	K	K	E	A	S	A	G	N	F	A	D	L	L	A	H	S	D	G	L	I	K	N	I	S	D	D	L	R	A	L	D	K	L	I	V	.
Query Conservation																																																																																	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	P	V	A	R	A	N	S	R	L	L	I	H	R	I	Q	R	D	W	C	G	Q	V	D	L	I	L	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	K	E	A	A	R	V	Q	A	R	K	E	L	R	E	S	L	T	G	V	S	P	L	F	A	D
Template Known Secondary structure		S	S																		T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																				G	G	G	G	G	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		K	P	N	A	V	N	G	E	L	S	E	D	D	I	Q	L	F	P	L	L	R	N	L	T	L	V	.	.	A	G	I	N	W	P	S	R	V	A	D	Y	R	D	N	M	A	K	Q	T	Q	I	N	L	L
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		K	P	F	F	L	S	E	E	Q	S	L	V	D	C	C	L	L	P	I	L	W	R	L	P	V	L	G	I	E	L	P	R	Q	A	K	P	L	L	D	Y	X	E	R	Q	F	A	R	E	A	F	Q	A	S
Template Known Secondary structure		S	S	B	T	T	B	S	S														T	T	T	T	T	T					G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions